Create the needed folders to run GMACS

Source: R/SetGMACSfold.R

Function to create empty folders needed to run GMACS: /build, /build/debug, /build/release, and a folder for the stock(S) (Spc) of interest (/build/Spc).

SetGMACSfold(vv = NULL, Dir = NULL, Spc = NULL, Sp = NULL, verbose = FALSE)

Arguments

vv

  • integer index in Dir indicating root folder to create these base folders.

Dir

  • vector of root folder names

Spc

  • vector of species names

Sp

  • integer index in Spc indicating the name(s) of the species for which the folder needs to be created. If Sp = "all", then a folder will be created for all species designated in Spc.

verbose

  • flag (TRUE/FALSE) to print processing information

Value

nothing

Details

Both the input and output files of GMACS will be contained in the folder whose name corresponds to the species of interest. When starting from scratch, you will need to provide this folder with all the assessment files needed by GMACS (.dat, .ctl, and .prj files).